Frontiers

From bacteria, the keys to therapies of the future

Over 50 immune systems discovered by Gruber Genetics Prize 2025 winner Rotem Sorek offer tools to treat infections and regulate the immune response

by Michela Moretti

5' min read

5' min read

Our immune system is the result of the inheritance and evolution of systems that bacteria had already perfected over millions of generations of fighting viruses. This was demonstrated by the Israeli geneticist and molecular biologist Rotem Sorek, who was awarded the Gruber Genetics Prize 2025 a few days ago. His discoveries involve the identification of dozens of hitherto unknown bacterial defence mechanisms, opening up the possibility of new therapeutic strategies not only for viral infections, but also for more precisely modulating the human immune response. An enormous potential, considering that it is precisely the use of a bacterial defence system, Crispr-Cas, that has revolutionised gene editing, allowing DNA to be modified with surgical precision.

Defending against phages: the invisible war of bacteria

.

For several years, Sorek has been studying bacteria in his own laboratory, 'The Sorek Lab', at the Weizmann Institute of Science in Rehovot, Israel, observing the defence systems of bacteria, which for millions of years have been under attack by viruses called phages (bacteriophages), which outnumber them 10 to 1, and to identify as yet unknown defence systems. The group discovered a much larger and more sophisticated number of techniques than ever imagined.

Loading...

The breakthrough in Sorek's research came with the observation that bacterial defence systems are not randomly distributed throughout the genome, but cluster in specific regions of the DNA that he called 'islands of defence'. The geneticist realised that if genes whose function we do not know are found next to known defence genes, those are probably also part of the defence system. Sorek then developed a completely new method to find new defence systems, through computational analysis of the DNA of more than 45,000 different types of bacteria, looking for groups of genes that often appeared close to already known defence systems. Finally, he took these candidates and tested them in the laboratory to see if they really did protect bacteria from viruses.

Precision Bacterial Weapons

.

In 2018, Sorek published the results of his new method and announced the discovery of 9 new bacterial defence systems with surprising characteristics.

The Zorya system, for example, works in a very ingenious way: bacteria normally have structures called flagella that help them swim; Zorya 'steals' parts of this movement system and uses them to create special channels in the cell wall that, when the bacterium is attacked by a virus, open and cause the death of the infected cell, preventing the virus from reproducing and protecting other bacteria in the vicinity.

The Thoeris system, on the other hand, when it detects a virus, triggers a response that leads to the death of the infected cell. The Wadjet system is still different. Normally, bacteria have proteins that help organise their DNA; Wadjet takes these organiser proteins and uses them to recognise and block small pieces of invading DNA called plasmids. Four years later, in 2022, Sorek applied his method on an even larger scale and discovered 21 more defence systems. In all, over 50 systems were discovered, a huge number considering that only a handful were known prior to his work. Even more varied and sophisticated systems: some use parts similar to those found in animals and plants to fight viruses. Others directly manipulate the DNA and RNA of viruses to render them harmless. Still others use 'poison and antidote' systems: they produce toxic substances that would normally kill even the bacterium itself, but they also use the antidote. When a virus arrives, the system stops producing the antidote, killing the infected cell before the virus can reproduce.

The molecular ingenuity of microorganisms

.

But Sorek's most sensational discovery is not just about bacteria, but about the human immune system. Many of the defence weapons that our immune system uses to fight viruses and infections already existed in bacteria billions of years ago. Such as the cGas-Sting system, first discovered in animals as an important mechanism for detecting viruses. It works like this: when a human cell detects viral DNA, it produces an alarm molecule that activates a protein, which sets the whole immune response in motion. Sorek found that bacteria use the same type of alarm molecules and the same mechanisms to activate their defences.

Another fascinating defence mechanism unites humans and bacteria: when our cells are severely infected, they sometimes 'sacrifice' themselves to protect the rest of the body by creating holes in their membrane; the proteins that create these holes are called gasdermines. Sorek found that bacteria also have gasdermines that function in the same way: when infected with viruses, they commit suicide to protect the other bacteria in the colony. Bacteria also have identical parts of proteins, such as the Toll-like receptors that recognise when there is an infection and activate defences, or the viperin protein that creates special molecules to block the reproduction of viruses.

This discovery has completely overturned what we thought about the evolution of human immunity and also provides new ideas for developing medicines and therapies.

According to the theory of endosymbiosis, millions of years ago a bacterium and an archaeon (another type of microorganism) fused together to form the first eukaryotic (i.e. nucleated) cell. This primitive cell became the ancestor of all complex organisms: plants, animals, fungi. Sorek proposes that when this ancestral fusion occurred, the new hybrid cell not only inherited the DNA of the two microorganisms, but also their defence systems against viruses. Once these bacterial defence systems were inherited, the primitive eukaryotic cell modified and refined them in the course of evolution. What were initially simple systems to protect a single bacterial cell from viruses, evolved into the complex immune mechanisms that today protect organisms like us, made up of trillions of cells.

Many of these bacterial molecules are now being studied as potential antiviral therapies for humans. What makes them interesting is their inherent ability to distinguish between 'self' and 'non-self', i.e. to recognise what belongs to the cell and what is foreign, and to target specific molecules with great precision: they are therefore promising candidates for future biotechnological applications, for instance to modulate the human immune response more precisely.

Sorek founded a whole new field of research that did not exist before, because prior to his systematic studies, research into bacterial immune systems was fragmentary and occasional. It is a field that involves groups all over the world: the defence systems he discovered are now being studied by structural biologists (who study the shape of proteins), biochemists (who analyse their chemical reactions), bioinformaticians (who analyse their genetic sequences) and immunologists (who study their defensive functions).

At the award ceremony for the Gruber Prize 2025, Sorek will receive half a million US dollars. This is one of the most prestigious international prizes in the field of genetics, awarded annually by the Gruber Foundation in collaboration with Yale University, and considered one of the 'alternative Nobel Prizes' due to its importance and impact in the global scientific community.

Copyright reserved ©
Loading...

Brand connect

Loading...

Newsletter

Notizie e approfondimenti sugli avvenimenti politici, economici e finanziari.

Iscriviti